STRINGSTRING
BPSL3378 BPSL3378 BPSS0224 BPSS0224 BPSL0301 BPSL0301 BPSL3379 BPSL3379 BPSS1487 BPSS1487 BPSS2118 BPSS2118 BPSS1982 BPSS1982 BPSL0453 BPSL0453
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSL3378Putative heavy metal resistance membrane ATPase; Similar to Pseudomonas putida CadA SWALL:Q93TP6 (EMBL:AF333961) (737 aa) fasta scores: E(): 4e-100, 65.9% id in 745 aa, and to Ralstonia metallidurans Pb-efflux ATPase PbrA SWALL:Q9AKR5 (EMBL:AJ278984) (798 aa) fasta scores: E(): 1.1e-93, 66.94% id in 714 aa, and to Staphylococcus aureus probable cadmium-transporting ATPase CadA SWALL:CADD_STAAU (SWALL:P37386) (804 aa) fasta scores: E(): 2.8e-88, 40.3% id in 722 aa. CDS is extended at the N-terminus in comparison to orthologues. (836 aa)    
Predicted Functional Partners:
BPSS0224
Putative cation-transporting ATPase membrane protein; No significant database matches to the full length CDS. N-terminal region is similar to Similar to Homo sapiens copper-transporting ATPase 2 ATP7B or WND or PWD or WC1 SWALL:AT7B_HUMAN (SWALL:P35670) (1465 aa) fasta scores: E(): 3e-07, 27% id in 300 aa. C-terminal region is similar to Ralstonia solanacearum probable cation-transporting ATPase transmembrane protein rsc3348 or rs02623 SWALL:Q8XU45 (EMBL:AL646074) (748 aa) fasta scores: E(): 1.1e-121, 59.89% id in 768 aa, and to Synechocystis sp. cation-transporting ATPase PacS or sll1 [...]
 
 
0.853
BPSL0301
Putative cheavy metal binding protein; Similar to Salmonella typhimurium putative copper chaperone stm0355 SWALL:Q8ZRG5 (EMBL:AE008711) (64 aa) fasta scores: E(): 5.8e-06, 40.98% id in 61 aa, and to Brucella melitensis heavy metal binding protein bmei1032 SWALL:Q8YGX3 (EMBL:AE009543) (65 aa) fasta scores: E(): 0.00018, 43.07% id in 65 aa.
  
 
 0.821
BPSL3379
MerR family regulatory protein; Similar to Escherichia coli, and Escherichia coli O157:H7 Zn(ii)-responsive regulator of zntA ZntR SWALL:ZNTR_ECOLI (SWALL:P36676) (141 aa) fasta scores: E(): 3.8e-13, 39.06% id in 128 aa, and to Pseudomonas putida MerR family response regulator of cadmium resistance CadR SWALL:Q93TP7 (EMBL:AF333961) (147 aa) fasta scores: E(): 3e-28, 58.33% id in 144 aa.
 
  
 0.722
BPSS1487
Similar to Ralstonia solanacearum probable major anaerobically induced outer membrane transmembrane protein rsp1503 or rs03038 SWALL:Q8XPY3 (EMBL:AL646085) (510 aa) fasta scores: E(): 3.3e-93, 71.45% id in 522 aa, and to Neisseria meningitidis nitrite reductase, major outer membrane copper-containing protein AniA or nma1887 SWALL:Q9JTB8 (EMBL:AL162757) (386 aa) fasta scores: E(): 1.9e-67, 58.26% id in 357 aa, and to Neisseria meningitidis major anaerobically induced outer membrane protein nmb1623 SWALL:Q9JYE1 (EMBL:AE002512) (390 aa) fasta scores: E(): 3.1e-67, 57.7% id in 357 aa; Belo [...]
 
  
 0.464
BPSS2118
Putative ArsR family transcriptional regulator; Similar to Streptomyces peucetius ORF1 and ORF2 SWALL:Q9ZF16 (EMBL:AJ005575) (226 aa) fasta scores: E(): 2.6e-27, 42.08% id in 221 aa, and to Mycobacterium tuberculosis hypothetical 23.8 kDa protein rv1674c or mtv047.09c or mt1712 SWALL:O53921 (EMBL:AL022002) (218 aa) fasta scores: E(): 7e-36, 51.83% id in 218 aa.
  
  
 0.463
BPSS1982
Similar to Agrobacterium tumefaciens cation efflux system protein atu0891 or agr_c_1625 SWALL:Q8UGZ4 (EMBL:AE009054) (338 aa) fasta scores: E(): 2.4e-36, 46.6% id in 412 aa, and to the N-terminal region of Escherichia coli zinc transporter ZitB or b0752 SWALL:ZITB_ECOLI (SWALL:P75757) (313 aa) fasta scores: E(): 4.1e-15, 39.24% id in 186 aa. Note: This CDS presents no similarities in the region between residue 170 and 280.
  
  
 0.445
BPSL0453
Putative cytochrome c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.436
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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